FastQCFastQC Report
Mon 28 Oct 2019
MinIon_4000.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameMinIon_4000.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4000
Sequences flagged as poor quality0
Sequence length142-31476
%GC31

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTGGGTGTTTAACCGTTTTCGCATTTATCGTGAAACGCTTTCGCGTTT100.25No Hit
ATTGGGTGTTTAACCGTTTTCGCATTTATCGTGAAACGCTTTCGCGTTTT50.125No Hit
AGTTTGGGTGTTTAACCGTTTTCGCATTTATCGTGAAACGCTTTCGCGTT50.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)