Bachelor Theses

Name Thesis
Hubacek Michal Utilization of Non-canonical Amino Acids in Protein Engineering (Department of Molecular Biology and Genetics, 2016-2017)
Libichova Lenka Methods for Construction of Smart Mutant Libraries in Protein Engineering (Department of Molecular Biology and Genetics, 2016-2017)
Vasina Michal Application of Microfluidics in Characterisation of Substrate Specificity of Halogenalkane Dehalogenases (Department of Biophysical Chemistry, 2016-2017)
Nemeth Robin Study and Engineering of Tunnels in Proteins (Department of Biochemistry, 2016-2017)
Dockalova Veronika Photophysical Characteristics of Fluorescent Substrates for Enzymology (Department of Condensed Matter Physics, 2015-2016)
Toul Martin Kinetic Mechanism of Ancestral Haloalkane Dehalogenase (Department of Biochemistry, 2015-2016)
Markova Klara Crystallization and Structural Characterization of Stable Variants of Haloalkane Dehalogenase DhaA (Department of Experimental Biology, 2015-2016)
Solansky Pavel Application of Microfluidics in Metabolic Engineering (Department of Experimental Biology, 2015-2016)
Stourac Jan A System for Integration of Bioinformatics Tools for Analyzing Protein Tunnels (Department of Computer Systems and Communications, 2014-2015)
Korenciakova Zuzana Development of Fluorescent Substrates for Enzymologic Applications (Department of Biophysical Chemistry, 2014-2015)
Vavra Ondrej Correlated Mutations in Proteins (Department of Experimental Biology, 2013-2014)
Kunka Antonin Inhibitors of Halogenalkane Dehalogenases as Potential Antituberculotics (Department of Biochemistry, 2013-2014)
Surgentova Marta Computational Analysis of Protein Tunnels (Institute of Biostatistics and Analyses, 2012-2013)
Szelcsanyiova Petra Screening of Isolated or Evolved Biocatalysts with High Stability a Activity In vitro and In vivo (Department of Microbiology and Molecular Biotechnology, 2011-2012)
Buryska Tomas Developement of Haloalkane Dehalogenase Inhibitors (Department of Biochemistry, 2010-2011)
Ghazalova Tereza Teoretical Tools for Engineering of Protein Tunnels (National Centre for Biomolecular Research, 2010-2011)
Modrava Veronika Virtual Screening of Biologically Active Compounds (National Centre for Biomolecular Research, 2010-2011)
Tischler Jakub Prediction of Effect of Amino Acid Substitution on Protein Function (Research Centre for Toxic Compounds in the Environment, 2010-2011)
Harnos Jakub Structure, Function and Evolution of Haloalkane Dehalogenases (Department of Experimental Biology, 2010-2011)
Hankeova Simona Effect of Ions on Catalytic Function of Hydrolytic Enzymes (Department of Experimental Biology, 2009-2010)
Bednar David Molecular Modelling of Haloalkane Dehalogenase Activity with Cyclodiene Insecticides (Department of Biochemistry, 2009-2010)
Drienovska Ivana Characterization of Novel Biocatalyst Haloalkane Dehalogenase DhcA from Halophilic Microorganism Hahella chejuensis KCTC 2396 (Department of Biochemistry, 2009-2010)
Matejicek Jiri Calculation of Attributes for Prediction of Effects of Mutation on Protein Function (Brno University of Technology, Faculty of Information Technology, 2008-2009)
Lisak Peter Development of Meta-Server for Prediction of Mutations Effects on Protein Function (Brno University of Technology, Faculty of Information Technology, 2008-2009)
Daniel Lukas Study of Substrate Specificity of Haloalkane Dehalogenases by Virtual Screening (Institute of Experimental Biology, 2008-2009)
Polinek Jiri Novel Bacterial Sources of Haloalkane Dehalogenases and Study of their Function (Department of Microbiology, 2006-2007)
Dvorak Pavel Methods of Directed Evolution: Applications towards Engineering of Haloalkane Dehalogenases (Department of Molecular Biology, 2006-2007)
Stepankova Veronika Medium Engineering of Haloalkane Dehalogenase Catalysis (Department of Biochemistry, 2005-2006)
Moninec Jiri Development of a System for Advertising of Academic Positions (Faculty of Informatics, 2003-2004)
Jerabek Petr Quantum-Mechanics Study of the Dehalogenation of the 1,2,3-trichloropropane by Haloalkane Dehalogenases (Department of Biochemistry, 2003-2004)

Ondrej Vavra celebrating success with his presentation on CaverDock
Lecture by Dr. Stavrakis from ETH Zurich
High evaluation of the team’s research performance
Klaudia Chmelova and Veronika Liskova passed doctoral state exam
ELIXIR CZ annual conference 15 – 16 Nov, 2017
New video explaining the goals of Rafts4Biotech EU project
Invitation to a presentation by Synthetic Genomics