Diploma Theses

Name Thesis
Stourac Jan Software Tool for Automated Design of Mutations and Smart Libraries for Protein Engineering (Department of Bioinformatics, 2015-2017)
Vavra Ondrej Methods for Identification of Biologically Relevant Tunnels in Proteins (Department of Genomics and Proteomics, 2015-2017)
Kunka Antonin Structural Base of Protein Stabilisation (Department of Biochemistry, 2014-2016)
Musil Milos Predictor of the Effect of Amino Acid Substitutions on Protein Function (Department of Information Systems, Brno University of Technology, 2014-2015)
Szelcsanyiova Petra Biochemical Characterization of Haloalkane Dehalogenases with Modified Tunnels (Department of Microbiology, 2012-2014)
Buryska Tom Development of Dehalogenase Inhibitors – Potential Antituberculotics (Department of Biochemistry, 2011-2013)
Neuwirth Ondrej Development of Inhibitors of Dehalogenases – Potential Antituberculotics (Department of Biochemistry, 2010-2013)
Chrast Lukas Characterization of Novel Biocatalysts from Extremophilic Bacteria (Department of Microbiology and Molecular Biotechnology, 2010-2012)
Drienovska Ivana Biochemical Characterization of the First Haloalkane Dehalogenase DpcA Isolated From Extremophilic Organism (Department of Biochemistry, 2011-2012)
Daniel Lukas In Silico Study of Substrate Specificity of Haloalkane Dehalogenases (Department of Biochemistry, 2009-2011)
Wolny Rostislav Developement of Bioinformatics Server (Faculty of Informatics, 2008-2010)
Dvorak Pavel Directed Evolution of Haloalkane Dehalogenase DhaA towards Increased
Activity with 1,2-dichloroethane (Department of Microbiology, 2008-2009)
Polinek Jiri Fermentative Production of Haloalkane Dehalogenases (Department of Microbiology, 2008-2009)
Pavelka Antonin HotSpot
Wizard – Tool for Selection of Protein Engineering Hot Spots (Faculty of Informatics, 2007-2008)
Stepankova Veronika Medium Engineering of Haloalkane Dehalogenase Catalysis: Effect of Water-Miscible Organic Solvents (Department of Biochemistry, 2005-2008)
Holub Peter Protein Engineering of Haloalkane Dehalogenase LinB: Towards the Change of Reaction Mechanism (Department of Biochemistry, 2006-2008)
Jerabek Petr Molecular Modeling of Enantioselectivity of Haloalkane Dehalogenase LinB (Department of Biochemistry, 2005-2007)
Bidmanova Sarka Development and Construction of Biosensors for Detection of Halogenated Compounds in the Environment (Department of Microbiology, 2005-2007)
Brezovsky Jan Computer-Assisted Study of Enzymatic Dehalogenation of DDT (Department of Biophysics, 2005-2006)
Klvana Martin Computer Modelling of Bacterial Enzymes Involved in Degradation of Halogenated Hydrocarbons (Department of Microbiology, 2002-2004)
Tesinska Iva Mycobacterial Haloalkane Dehalogenases Rv2296 and Rv2579 (Department of Biochemistry, 2002-2004)
Dobes Petr Structure-Function Characterization of the Elicitin Cryptogein (Department of Biochemistry, 2001-2003)
Budova Martina Exprese, purifikace a kineticka charakterizace haloalkan dehalogenas (Department of Biochemistry, 2001-2002)
Jedlicka Tomas Pocitacove modelovani enzym-substrat komplexu haloalkan dehalogenaz (Department of Environmental Sciences and Ecotoxicology, 2000-2003)
Strouhal Michal Screening of Genes rv2579, rv2296 and dhmA in Isolates of M. bovis, M. avium a M. paratuberculosis (Department of Microbiology, 2000-2003)
Monincova Marta Study of Kinetics of Microbial Dehalogenation Reactions (Department of Microbiology, 2000-2002)
Marvanova Sona Biochemical Characterization of Mutant Haloalkane Dehalogenases (Department of Environmental Sciences and Ecotoxicology, 1999-2001)
Czernekova Vladka Purification of Dehalogenase from Bacterium Mycobacterium avium (Department of Biochemistry, 1999-2001)
Slanina Michal Hydrolytic Dehalogenation of Unsaturated Aliphatic Hydrocarbons (Department of Environmental Sciences and Ecotoxicology, 1998-1999)
Bohac Michal Computer Modelling of Dehalogenation Reactions of Haloalkane Dehalogenases (Department of Environmental Sciences and Ecotoxicology, 1997-2000)
Prokop Martin TRITON – Visualization Software for Study of Enzymatic Reactions (Department of Organic Chemistry, 1995-1997)
Hynkova Kamila Estimation of Steady-State Constants of Haloalkane Dehalogenase LinB for Group of Halogenated Hydrocarbons (Department of Environmental Sciences and Ecotoxicology, 1995-1997)
Jesenska Andrea Study of Structure-Biodegradability Relationships for Halogenated Aliphatic Hydrocarbons (Department of Microbiology, 1995-1997)
Blaha Ludek Applications of Bioluminiscence Test (Department of Microbiology, 1994-1996)

Ondrej Vavra celebrating success with his presentation on CaverDock
Lecture by Dr. Stavrakis from ETH Zurich
High evaluation of the team’s research performance
Klaudia Chmelova and Veronika Liskova passed doctoral state exam
ELIXIR CZ annual conference 15 – 16 Nov, 2017
New video explaining the goals of Rafts4Biotech EU project
Invitation to a presentation by Synthetic Genomics