{"id":638,"date":"2013-01-29T13:00:40","date_gmt":"2013-01-29T13:00:40","guid":{"rendered":"http:\/\/loschmidt.chemi.muni.cz\/peg\/?page_id=638"},"modified":"2025-06-26T04:21:42","modified_gmt":"2025-06-26T04:21:42","slug":"bachelor-theses","status":"publish","type":"page","link":"https:\/\/loschmidt.chemi.muni.cz\/peg\/courses\/bachelor-theses\/","title":{"rendered":"Bachelor Theses"},"content":{"rendered":"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Name<\/th>\nThesis<\/th>\n<\/tr>\n
Makuch Tomas<\/td>\nComputational Analysis of the FYY Protein (Department of Physics, Biophysics, 2024-2025)<\/td>\n<\/tr>\n
Bryja Matej<\/td>\nAnalysis of Protein-Protein Interactions Using In Silico Methods With Focus on Thrombolytic Staphylokinase (Department of Biochemistry, Bioinformatics, 2024-2025)<\/td>\n<\/tr>\n
Velatova Nikola<\/td>\nGenetic Variants of Apolipoprotein E (ApoE) and Their Roles in Neurodegenerative Diseases (Department of Experimental Biology, Medical Genetics and Molecular Diagnostics, 2021-2025)<\/td>\n<\/tr>\n
Demovic Matej<\/td>\nInterpreting Protein Molecular Dynamics Data with Explainable Artificial Intelligence (RCX, Computational Biology and Biomedicine, 2024-2025)<\/td>\n<\/tr>\n
Volf Eduard<\/td>\nMachine Learning-Based Tools for Predicting B-cell-dependent Immune Response to Protein-Bbased Therapeutics (Department of Experimental Biology, Medical Genetics and Molecular Diagnostics, 2022-2025)<\/td>\n<\/tr>\n
Kapustova Linda<\/td>\nIdentification and Study of Potential Drugs Targeting Apolipoprotein E4 in Alzheimer’s Disease Using Molecular Modelling Methods (Department of Biochemistry, 2023-2024)<\/td>\n<\/tr>\n
Havlasek Martin<\/td>\nProbing the Limits of Modern Approaches to Protein Stabilization (Department of Biochemistry, 2021-2023)<\/td>\n<\/tr>\n
Kabourek Petr<\/td>\nLLWS: REST Backend for Centralized Execution of Bioinformatics Calculations (Department of Computer Systems and Communications, FI MU, 2019-2023)<\/td>\n<\/tr>\n
Pailozian Karen<\/td>\nMachine Learning-based Prediction of Protein Melting Temperatures for Discovery of Stable Biocatalysts (Department of Biochemistry, 2020-2023)<\/td>\n<\/tr>\n
Arefiev Ihor<\/td>\nDesign of Dioxygenases to Catalyze Sesquiterpenes (Department of Biophysics and Medical Informatics, National Taras Shevchenko University of Kyiv, 2022-2023)<\/td>\n<\/tr>\n
Kohutekova Tana<\/td>\nDirected Evolution of Enzymes on Microfluidic Chip (Department of Biomedical Engineering, FEKT VUT, 2021-2023)<\/td>\n<\/tr>\n
Jakab Karol<\/td>\nRational Design of Active-Site Loops in Dioxygenases Using Molecular Modelling Methods (Department of Biochemistry, 2021-2023)<\/td>\n<\/tr>\n
Szotkowska Veronika<\/td>\nThe Study of Protein Unfolding Utilizing Molecular Dynamics Simulation (RECETOX, 2019-2023)<\/td>\n<\/tr>\n
Smrckova Anna<\/td>\nMolecular Principles of the Bioluminescence Resonance Energy Transfer and Their Biotechnological Applications (Department of Experimental Biology, 2019-2022)<\/td>\n<\/tr>\n
Lacko David<\/td>\nPlatform for Biological Sequence Analysis Using Machine Learning (Department of Computer Systems, FIT VUT, 2019-2022)<\/td>\n<\/tr>\n
Pluskal Daniel<\/td>\nBiochemical Analysis of a Luciferase Complex (Department of Biochemistry, 2018-2021)<\/td>\n<\/tr>\n
Faldynova Hana<\/td>\nEngineering of Protein Solubility (Department of Experimental Biology, 2018-2021)<\/td>\n<\/tr>\n
Marko Julius<\/td>\nPrediction of the Effect of Mutation on Protein Solubility
\nUsing Machine Learning (Department of Information Systems, FIT VUT, 2017-2020)<\/td>\n<\/tr>\n
Borko Simeon<\/td>\nIdentification of Related Enzymes (Department of Information Systems FIT VUT, 2017-2020)<\/td>\n<\/tr>\n
Slanska Michaela<\/td>\nDevelopment of Fluorogenic Substrates for Enzyme Kinetics and Protein Labelling (Department of Biochemistry, 2017-2020)<\/td>\n<\/tr>\n
Slanska Katerina<\/td>\nStudy of Protein Solubility and Aggregation (Department of Biochemistry, 2016-2019)<\/td>\n<\/tr>\n
Fronkova Sabina<\/td>\nNew Trends in Methodologies for Structural Analysis of Enzymes (Department of Molecular Biology and Genetics, 2018-2020)<\/td>\n<\/tr>\n
Hubacek Michal<\/td>\nUtilization of Non-canonical Amino Acids in Protein Engineering (Department of Molecular Biology and Genetics, 2016-2017)<\/td>\n<\/tr>\n
Libichova Lenka<\/td>\nMethods for Construction of Smart Mutant Libraries in Protein Engineering (Department of Molecular Biology and Genetics, 2016-2017)<\/td>\n<\/tr>\n
Vasina Michal<\/td>\nApplication of Microfluidics in Characterisation of Substrate Specificity of Halogenalkane Dehalogenases (Department of Biophysical Chemistry, 2016-2017)<\/td>\n<\/tr>\n
Nemeth Robin<\/td>\nStudy and Engineering of Tunnels in Proteins (Department of Biochemistry, 2016-2017)<\/td>\n<\/tr>\n
Dockalova Veronika<\/td>\nPhotophysical Characteristics of Fluorescent Substrates for Enzymology (Department of Condensed Matter Physics, 2015-2016)<\/td>\n<\/tr>\n
Toul Martin<\/td>\nKinetic Mechanism of Ancestral Haloalkane Dehalogenase (Department of Biochemistry, 2015-2016)<\/td>\n<\/tr>\n
Markova Klara<\/td>\nCrystallization and Structural Characterization of Stable Variants of Haloalkane Dehalogenase DhaA (Department of Experimental Biology, 2015-2016)<\/td>\n<\/tr>\n
Solansky Pavel<\/td>\nApplication of Microfluidics in Metabolic Engineering (Department of Experimental Biology, 2015-2016)<\/td>\n<\/tr>\n
Stourac Jan<\/td>\nA System for Integration of Bioinformatics Tools for Analyzing Protein Tunnels (Department of Computer Systems and Communications, 2014-2015)<\/td>\n<\/tr>\n
Korenciakova Zuzana<\/td>\nDevelopment of Fluorescent Substrates for Enzymologic Applications (Department of Biophysical Chemistry, 2014-2015)<\/td>\n<\/tr>\n
Vavra Ondrej<\/td>\nCorrelated Mutations in Proteins (Department of Experimental Biology, 2013-2014)<\/td>\n<\/tr>\n
Kunka Antonin<\/td>\nInhibitors of Halogenalkane Dehalogenases as Potential Antituberculotics (Department of Biochemistry, 2013-2014)<\/td>\n<\/tr>\n
Surgentova Marta<\/td>\nComputational Analysis of Protein Tunnels (Institute of Biostatistics and Analyses, 2012-2013)<\/td>\n<\/tr>\n
Szelcsanyiova Petra<\/td>\nScreening of Isolated or Evolved Biocatalysts with High Stability a Activity In vitro<\/em> and In vivo<\/em> (Department of Microbiology and Molecular Biotechnology, 2011-2012)<\/td>\n<\/tr>\n
Buryska Tomas<\/td>\nDevelopement of Haloalkane Dehalogenase Inhibitors (Department of Biochemistry, 2010-2011)<\/td>\n<\/tr>\n
Ghazalova Tereza<\/td>\nTeoretical Tools for Engineering of Protein Tunnels (National Centre for Biomolecular Research, 2010-2011)<\/td>\n<\/tr>\n
Modrava Veronika<\/td>\nVirtual Screening of Biologically Active Compounds (National Centre for Biomolecular Research, 2010-2011)<\/td>\n<\/tr>\n
Tischler Jakub<\/td>\nPrediction of Effect of Amino Acid Substitution on Protein Function (Research Centre for Toxic Compounds in the Environment, 2010-2011)<\/td>\n<\/tr>\n
Harnos Jakub<\/td>\nStructure, Function and Evolution of Haloalkane Dehalogenases (Department of Experimental Biology, 2010-2011)<\/td>\n<\/tr>\n
Hankeova Simona<\/td>\nEffect of Ions on Catalytic Function of Hydrolytic Enzymes (Department of Experimental Biology, 2009-2010)<\/td>\n<\/tr>\n
Bednar David<\/td>\nMolecular Modelling of Haloalkane Dehalogenase Activity with Cyclodiene Insecticides (Department of Biochemistry, 2009-2010)<\/td>\n<\/tr>\n
Drienovska Ivana<\/td>\nCharacterization of Novel Biocatalyst Haloalkane Dehalogenase DhcA from Halophilic Microorganism Hahella chejuensis KCTC 2396 (Department of Biochemistry, 2009-2010)<\/td>\n<\/tr>\n
Matejicek Jiri<\/td>\nCalculation of Attributes for Prediction of Effects of Mutation on Protein Function (Brno University of Technology, Faculty of Information Technology, 2008-2009)<\/td>\n<\/tr>\n
Lisak Peter<\/td>\nDevelopment of Meta-Server for Prediction of Mutations Effects on Protein Function (Brno University of Technology, Faculty of Information Technology, 2008-2009)<\/td>\n<\/tr>\n
Daniel Lukas<\/td>\nStudy of Substrate Specificity of Haloalkane Dehalogenases by Virtual Screening (Institute of Experimental Biology, 2008-2009)<\/td>\n<\/tr>\n
Polinek Jiri<\/td>\nNovel Bacterial Sources of Haloalkane Dehalogenases and Study of their Function (Department of Microbiology, 2006-2007)<\/td>\n<\/tr>\n
Dvorak Pavel<\/td>\nMethods of Directed Evolution: Applications towards Engineering of Haloalkane Dehalogenases (Department of Molecular Biology, 2006-2007)<\/td>\n<\/tr>\n
Stepankova Veronika<\/td>\nMedium Engineering of Haloalkane Dehalogenase Catalysis (Department of Biochemistry, 2005-2006)<\/td>\n<\/tr>\n
Moninec Jiri<\/td>\nDevelopment of a System for Advertising of Academic Positions (Faculty of Informatics, 2003-2004)<\/td>\n<\/tr>\n
Jerabek Petr<\/td>\nQuantum-Mechanics Study of the Dehalogenation of the 1,2,3-trichloropropane by Haloalkane Dehalogenases (Department of Biochemistry, 2003-2004)<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"

Name Thesis Makuch Tomas Computational Analysis of the FYY Protein (Department of Physics, Biophysics, 2024-2025) Bryja Matej Analysis of Protein-Protein Interactions Using In Silico Methods With Focus on Thrombolytic Staphylokinase (Department of Biochemistry, Bioinformatics, 2024-2025) Velatova Nikola Genetic Variants of Apolipoprotein E (ApoE) and Their Roles in Neurodegenerative Diseases (Department of Experimental Biology, Medical Genetics […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":868,"menu_order":24,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"footnotes":""},"class_list":["post-638","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/638","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/comments?post=638"}],"version-history":[{"count":56,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/638\/revisions"}],"predecessor-version":[{"id":10702,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/638\/revisions\/10702"}],"up":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/868"}],"wp:attachment":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/media?parent=638"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}