{"id":646,"date":"2013-01-29T13:06:17","date_gmt":"2013-01-29T13:06:17","guid":{"rendered":"http:\/\/loschmidt.chemi.muni.cz\/peg\/?page_id=646"},"modified":"2025-11-21T15:25:35","modified_gmt":"2025-11-21T15:25:35","slug":"doctoral-theses","status":"publish","type":"page","link":"https:\/\/loschmidt.chemi.muni.cz\/peg\/courses\/doctoral-theses\/","title":{"rendered":"Doctoral Theses"},"content":{"rendered":"<table>\n<tbody>\n<tr>\n<th>Name<\/th>\n<th>Thesis<\/th>\n<\/tr>\n<tr>\n<td>Horackova Jana<\/td>\n<td>Analysis of Luciferase Enzymes by Molecular Modeling (Environmental Health Sciences, 2021-2025)<\/td>\n<\/tr>\n<tr>\n<td>Velecky Jan<\/td>\n<td>Predicting Mutational Properties of Proteins with Machine Learning (Environmental Health Sciences, 2020-2025)<\/td>\n<\/tr>\n<tr>\n<td>Khan Rayyan Tariq<\/td>\n<td>In Silico Techniques to Design Proteins and Predict Their Properties (Molecular and Cell Biology and Genetics, 2019-2025)<\/td>\n<\/tr>\n<tr>\n<td>Kizovsky Martin<\/td>\n<td>Raman Microspectroscopy in Environmental Research (Environmental Health Sciences, 2019-2024)<\/td>\n<\/tr>\n<tr>\n<td>Dvorsky Jan<\/td>\n<td>Development of Bioinformatics Tools and Databases for Protein Engineering (Environmental Health Sciences, 2019-2024)<\/td>\n<\/tr>\n<tr>\n<td>Vasina Michal<\/td>\n<td>Application of Microfluidics in Protein and Metabolic Engineering (Environmental Health Sciences, 2019-2023)<\/td>\n<\/tr>\n<tr>\n<td>Vavra Ondrej<\/td>\n<td>Relationships between Enzyme Access Pathways and Catalytic Activity by the Methods of Molecular Modeling (Environmental Health Sciences, 2017-2023)<\/td>\n<\/tr>\n<tr>\n<td>Toul Martin<\/td>\n<td>Rational Protein Design Driven by Kinetic Studies (Molecular and Cell Biology and Genetics, 2018-2023)<\/td>\n<\/tr>\n<tr>\n<td>Hon Jiri<\/td>\n<td>Mining of Soluble Enzymes from Genomic Databases (Department of the Information Systems, Faculty of Information Technology, Brno University of Technology, 2014-2022)<\/td>\n<\/tr>\n<tr>\n<td>Musil Milos<\/td>\n<td>Computational Design of Stable Proteins (Department of the Information Systems, Faculty of Information Technology, Brno University of Technology, 2015-2021)<\/td>\n<\/tr>\n<tr>\n<td>Kunka Antonin<\/td>\n<td>Analysis of Protein Stability and Aggregation (Microbiology, 2016-2021)<\/td>\n<\/tr>\n<tr>\n<td>Vanacek Pavel<\/td>\n<td>Automated Exploration and Characterization of Novel Haloalkane Dehalogenases (Molecular and Cell Biology and Genetics, 2014-2020)<\/td>\n<\/tr>\n<tr>\n<td>Buryska Tomas<\/td>\n<td>Microfluidics in Enzyme Research (Microbiology, 2013-2018)<\/td>\n<\/tr>\n<tr>\n<td>Liskova Veronika<\/td>\n<td>Protein Engineering for Analysis of Structure-Function Relationships of Enzymes (Molecular and Cell Biology, 2012-2018)<\/td>\n<\/tr>\n<tr>\n<td>Bednar David<\/td>\n<td>Molecular Modelling of Structure-Function Relationships in Enzymes (Molecular and Cell Biology, 2012-2017)<\/td>\n<\/tr>\n<tr>\n<td>Bendl Jaroslav<\/td>\n<td>Prediction of the Effect of Amino Acid Substitutions on Protein Function (Department of Computer Systems, Faculty of Information Technology, 2011-2016)<\/td>\n<\/tr>\n<tr>\n<td>Daniel Lukas<\/td>\n<td>Molecular Modeling of Enzymes&#8217; Substrate Specificity (Ecotoxicology, 2011-2016)<\/td>\n<\/tr>\n<tr>\n<td>Dvorak Pavel<\/td>\n<td>Engineering of the Synthetic Metabolic Pathway for Biodegradation of an Environmental Pollutant (Molecular and Cellular Biology, 2010-2014)<\/td>\n<\/tr>\n<tr>\n<td>Stepankova Veronika<\/td>\n<td>Biocatalysis in Non-Conventional Media (Biochemistry, 2009-2013)<\/td>\n<\/tr>\n<tr>\n<td>Hasan Khomaini<\/td>\n<td>Haloalkane dehalogenase from Unique Plant-Pathogenic Bacterium <em>Agrobacterium tumefaciens<\/em> C58: Biochemical Characteristics and Engineering (Environmental Chemistry, 2008-2012)<\/td>\n<\/tr>\n<tr>\n<td>Bidmanova Sarka<\/td>\n<td>Development of Optical Biosensors for Monitoring of Pollutants in the Environment (Environmental Chemistry, 2008-2012)<\/td>\n<\/tr>\n<tr>\n<td>Brezovsky Jan<\/td>\n<td>Computer Modelling of Enzymatic Reactions (Environmental Chemistry, 2007-2011)<\/td>\n<\/tr>\n<tr>\n<td>Chovancova Eva<\/td>\n<td>Bioinformatic Analysis and Design of Haloalkane Dehalogenases (Environmental Chemistry, 2004-2011)<\/td>\n<\/tr>\n<tr>\n<td>Koudelakova Tana<\/td>\n<td>Isolation and Construction of Biocatalysts for Environmental Applications (Environmental Chemistry, 2004-2011)<\/td>\n<\/tr>\n<tr>\n<td>Klvana Martin<\/td>\n<td>Structure-Function Relationships of Haloalkane Dehalogenases (Microbiology, 2004-2009)<\/td>\n<\/tr>\n<tr>\n<td>Pavlova Martina<\/td>\n<td>Screening and <em>in vitro<\/em> Construction of Environmental Biocatalysts (Environmental Chemistry, 2001-2008)<\/td>\n<\/tr>\n<tr>\n<td>Chaloupkova Radka<\/td>\n<td>Structure-Function Relationships of Haloalkane Dehalogenase Enzymes (Biomolecular Chemistry, 2001-2008)<\/td>\n<\/tr>\n<tr>\n<td>Monincova Marta<\/td>\n<td>Functional Characterization and Classification of Haloalkane Dehalogenases (Biomolecular Chemistry, 2002-2008)<\/td>\n<\/tr>\n<tr>\n<td>Bohac Michal<\/td>\n<td>Computational Modelling of Enzymatic Dehalogenation Reactions (Department of Environmental Chemistry and Ecotoxicology, 2001-2004)<\/td>\n<\/tr>\n<tr>\n<td>Kmunicek Jan<\/td>\n<td>Rational Re-Design of Haloalkane Dehalogenases Guided by Comparative Binding Energy Analysis (Department of Physical Chemistry, 1999-2003)<\/td>\n<\/tr>\n<tr>\n<td>Jesenska Andrea<\/td>\n<td>Detoxification of Halogenated Aliphatic Compounds by Mycobacteria (Department of Environmental Chemistry and Ecotoxicology, 1997-2002)<\/td>\n<\/tr>\n<tr>\n<td>Hynkova Kamila<\/td>\n<td>Application of Gas Chromatography and Mass Spectroscopy for Study of Kinetics of Dehalogenation Reactions (Department of Environmental Chemistry and Ecotoxicology, 1997-2000)<\/td>\n<\/tr>\n<tr>\n<td>Kuty Michal<\/td>\n<td>Application of Quantum Chemistry Methods for Study of Biodegradation Reactions (Department of Organic Chemistry, 1996-1999)<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"<p>Name Thesis Horackova Jana Analysis of Luciferase Enzymes by Molecular Modeling (Environmental Health Sciences, 2021-2025) Velecky Jan Predicting Mutational Properties of Proteins with Machine Learning (Environmental Health Sciences, 2020-2025) Khan Rayyan Tariq In Silico Techniques to Design Proteins and Predict Their Properties (Molecular and Cell Biology and Genetics, 2019-2025) Kizovsky Martin Raman Microspectroscopy in Environmental [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":868,"menu_order":21,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"footnotes":""},"class_list":["post-646","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/646","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/comments?post=646"}],"version-history":[{"count":31,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/646\/revisions"}],"predecessor-version":[{"id":11056,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/646\/revisions\/11056"}],"up":[{"embeddable":true,"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/pages\/868"}],"wp:attachment":[{"href":"https:\/\/loschmidt.chemi.muni.cz\/peg\/wp-json\/wp\/v2\/media?parent=646"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}